BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A03SP1|AL427696
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1694 1764 0.0
>3x_Contig1694
Length = 18020
Score = 1764 bits (887), Expect = 0.0
Identities = 907/917 (98%)
Strand = Plus / Minus
Query: 1 caacacgatcaagtcatcagaattccaaataagggtgtccctcgtggagctagaggtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14257 caacacgatcaagtcatcagaattccaaataagggtgtccctcgtggagctagaggtgac 14198
Query: 61 aggggtgacatgcttgtcaagttcaagattgttatcaaaaaaccaaaggatgaaacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14197 aggggtgacatgcttgtcaagttcaagattgttatcaaaaaaccaaaggatgaaacagaa 14138
Query: 121 cgttatctatgggagaccttggcccacttgaccaatgataccactgcaagaaggaccatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14137 cgttatctatgggagaccttggcccacttgaccaatgataccactgcaagaaggaccatt 14078
Query: 181 actccctctggatcgtcggctaaggacaactcttcctctgctgataaagacacagttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14077 actccctctggatcgtcggctaaggacaactcttcctctgctgataaagacacagttgaa 14018
Query: 241 aacaatgaaggaaccatcaagaaattggaaaatttcttgtctaacactttaaagaagatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14017 aacaatgaaggaaccatcaagaaattggaaaatttcttgtctaacactttaaagaagatc 13958
Query: 301 agaggggaatgaaatccttaaatcgcatatatgctctcccgtcatacattccaccttcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13957 agaggggaatgaaatccttaaatcgcatatatgctctcccgtcatacattccaccttcat 13898
Query: 361 tctttcataattctttgattggatgaactaattacgacattggcattctcattattcatg 420
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 13897 tctttcataattctttgattggatgaactaattacgacaatagcattctcattattcatg 13838
Query: 421 taccacttacagcagtcatagccagtaattgcatatactgcacattattttataaaaccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13837 taccacttacagcagtcatagccagtaattgcatatactgcacattattttataaaaccc 13778
Query: 481 tttaacatcatgtaaataccaatttccctatatatatatvtnbgbgcncttagcgcataa 540
||||||||||||||||||||||||||||||||||||||| | || ||||||||||||
Sbjct: 13777 tttaacatcatgtaaataccaatttccctatatatatatataacggcgcttagcgcataa 13718
Query: 541 tacttatcgttttgatattctcttactagttatccctacttaccatatttagctcgggat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13717 tacttatcgttttgatattctcttactagttatccctacttaccatatttagctcgggat 13658
Query: 601 tgawattcatgccaatgacaacgaatgttttcagtaagggtcgatatgctttagtaactt 660
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13657 tgaaattcatgccaatgacaacgaatgttttcagtaagggtcgatatgctttagtaactt 13598
Query: 661 attctgaccatcgttgtcttcttaacattgtgacattgaaaattacttttgaatggaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13597 attctgaccatcgttgtcttcttaacattgtgacattgaaaattacttttgaatggaaaa 13538
Query: 721 agcataattatgtacaaaattcatcaattgaaatatactgaagataaatttcgaaggact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13537 agcataattatgtacaaaattcatcaattgaaatatactgaagataaatttcgaaggact 13478
Query: 781 tttgccaagagttaagagactatatctacgacttatcacttccgtacgacccattataaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13477 tttgccaagagttaagagactatatctacgacttatcacttccgtacgacccattataaa 13418
Query: 841 ccatccaatattccatgacatctccagatttgagaaaagtatgtttacccctgtkttcca 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 13417 ccatccaatattccatgacatctccagatttgagaaaagtatgtttacccctgttttcca 13358
Query: 901 ggaaaaatcttatcaga 917
|||||||||||||||||
Sbjct: 13357 ggaaaaatcttatcaga 13341
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9607
Number of Sequences: 1807
Number of extensions: 9607
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)